Yue JX, Li J, Aigrain L, Hallin J, Persson K, Oliver K, Bergström A, Coupland P, Warringer J, Lagomarsino MC, Fischer G, Durbin R, Liti G

Contrasting evolutionary genome dynamics between domesticated and wild yeasts.

Nat Genet 2017; 913-924. doi: 10.1038/ng.3847

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Zhang Q, Bassetti F, Gherardi M, Lagomarsino MC

Cell-to-cell variability and robustness in S-phase duration from genome replication kinetics.

Nucleic Acids Res 2017; 8190-8198. doi: 10.1093/nar/gkx556

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Mazzolini A, Grilli J, De Lazzari E, Osella M, Lagomarsino MC, Gherardi M

Zipf and Heaps laws from dependency structures in component systems.

Phys Rev E 2018; 012315. doi: 10.1103/PhysRevE.98.012315

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Nastały P, Purushothaman D, Marchesi S, Poli A, Lendenmann T, Kidiyoor GR, Beznoussenko GV, Lavore S, Romano OM, Poulikakos D, Lagomarsino MC, Mironov AA, Ferrari A, Maiuri P

Role of the nuclear membrane protein Emerin in front-rear polarity of the nucleus.

Nat Commun 2020; 2122. doi: 10.1038/s41467-020-15910-9

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Wlodarski M, Mancini L, Raciti B, Sclavi B, Lagomarsino MC, Cicuta P

Cytosolic Crowding Drives the Dynamics of Both Genome and Cytosol in Escherichia coli Challenged with Sub-lethal Antibiotic Treatments.

iScience 2020; 101560. doi: 10.1016/j.isci.2020.101560

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Calabrese L, Grilli J, Osella M, Kempes CP, Lagomarsino MC, Ciandrini L

Protein degradation sets the fraction of active ribosomes at vanishing growth.

PLoS Comput Biol 2022; e1010059. doi: 10.1371/journal.pcbi.1010059

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Mancini L, Crozat E, Javer A, Lagomarsino MC, Cicuta P

Dynamics of Bacterial Chromosomes by Locus Tracking in Fluorescence Microscopy.

Methods Mol Biol 2022; 155-170. doi: 10.1007/978-1-0716-2221-6_12

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Iuliani I, Mbemba G, Lagomarsino MC, Sclavi B

Direct single-cell observation of a key Escherichia coli cell-cycle oscillator.

Sci Adv 2024; eado5398. doi: 10.1126/sciadv.ado5398

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Foiani M, Cigan AM, Paddon CJ, Harashima S, Hinnebusch AG

GCD2, a translational repressor of the GCN4 gene, has a general function in the initiation of protein synthesis in Saccharomyces cerevisiae.

Mol Cell Biol 1991; 3203-16. doi: 10.1128/mcb.11.6.3203-3216.1991

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Cigan AM, Foiani M, Hannig EM, Hinnebusch AG

Complex formation by positive and negative translational regulators of GCN4.

Mol Cell Biol 1991; 3217-28. doi: 10.1128/mcb.11.6.3217-3228.1991

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Presta M, Foiani M, Rusnati M, Joseph-Silverstein J, Maier JA, Ragnotti G

High molecular weight immunoreactive basic fibroblast growth factor-like proteins in rat pituitary and brain.

Neurosci Lett 1988; 308-13. doi: 10.1016/0304-3940(88)90207-8

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Foiani M, Santocanale C, Plevani P, Lucchini G

A single essential gene, PRI2, encodes the large subunit of DNA primase in Saccharomyces cerevisiae.

Mol Cell Biol 1989; 3081-7. doi: 10.1128/mcb.9.7.3081-3087.1989

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Foiani M, Lindner AJ, Hartmann GR, Lucchini G, Plevani P

Affinity labeling of the active center and ribonucleoside triphosphate binding site of yeast DNA primase.

J Biol Chem 1989; 2189-94.

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Lucchini G, Francesconi S, Foiani M, Badaracco G, Plevani P

Yeast DNA polymerase--DNA primase complex; cloning of PRI 1, a single essential gene related to DNA primase activity.

EMBO J 1987; 737-42. doi: 10.1002/j.1460-2075.1987.tb04815.x

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Plevani P, Foiani M, Muzi Falconi M, Pizzagalli A, Santocanale C, Francesconi S, Valsasnini P, Comedini A, Piatti S, Lucchini G

The yeast DNA polymerase-primase complex: genes and proteins.

Biochim Biophys Acta 1988; 268-73. doi: 10.1016/0167-4781(88)90096-6

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Badaracco G, Valsasnini P, Foiani M, Benfante R, Lucchini G, Plevani P

Mechanism of initiation of in vitro DNA synthesis by the immunopurified complex between yeast DNA polymerase I and DNA primase.

Eur J Biochem 1986; 435-40. doi: 10.1111/j.1432-1033.1986.tb10463.x

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Plevani P, Foiani M, Valsasnini P, Badaracco G, Cheriathundam E, Chang LM

Polypeptide structure of DNA primase from a yeast DNA polymerase-primase complex.

J Biol Chem 1985; 7102-7.

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Plevani P, Magni G, Foiani M, Chang LM, Badaracco G

De novo DNA synthesis by yeast DNA polymerase I associated with primase activity.

Adv Exp Med Biol 1984; 281-6. doi: 10.1007/978-1-4684-8730-5_28

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Santocanale C, Foiani M, Lucchini G, Plevani P

The isolated 48,000-dalton subunit of yeast DNA primase is sufficient for RNA primer synthesis.

J Biol Chem 1993; 1343-8.

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Foiani M, Liberi G, Lucchini G, Plevani P

Cell cycle-dependent phosphorylation and dephosphorylation of the yeast DNA polymerase alpha-primase B subunit.

Mol Cell Biol 1995; 883-91. doi: 10.1128/MCB.15.2.883

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Muzi Falconi M, Piseri A, Ferrari M, Lucchini G, Plevani P, Foiani M

De novo synthesis of budding yeast DNA polymerase alpha and POL1 transcription at the G1/S boundary are not required for entrance into S phase.

Proc Natl Acad Sci U S A 1993; 10519-23. doi: 10.1073/pnas.90.22.10519

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Foiani M, Marini F, Gamba D, Lucchini G, Plevani P

The B subunit of the DNA polymerase alpha-primase complex in Saccharomyces cerevisiae executes an essential function at the initial stage of DNA replication.

Mol Cell Biol 1994; 923-33. doi: 10.1128/mcb.14.2.923-933.1994

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Bushman JL, Foiani M, Cigan AM, Paddon CJ, Hinnebusch AG

Guanine nucleotide exchange factor for eukaryotic translation initiation factor 2 in Saccharomyces cerevisiae: interactions between the essential subunits GCD2, GCD6, and GCD7 and the regulatory subunit GCN3.

Mol Cell Biol 1993; 4618-31. doi: 10.1128/mcb.13.8.4618-4631.1993

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Sun Z, Fay DS, Marini F, Foiani M, Stern DF

Spk1/Rad53 is regulated by Mec1-dependent protein phosphorylation in DNA replication and damage checkpoint pathways.

Genes Dev 1996; 395-406. doi: 10.1101/gad.10.4.395

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Ferrari M, Lucchini G, Plevani P, Foiani M

Phosphorylation of the DNA polymerase alpha-primase B subunit is dependent on its association with the p180 polypeptide.

J Biol Chem 1996; 8661-6. doi: 10.1074/jbc.271.15.8661

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Foiani M, Nadjar-Boger E, Capone R, Sagee S, Hashimshoni T, Kassir Y

A meiosis-specific protein kinase, Ime2, is required for the correct timing of DNA replication and for spore formation in yeast meiosis.

Mol Gen Genet 1996; 278-88. doi: 10.1007/s004380050323

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Marini F, Pellicioli A, Paciotti V, Lucchini G, Plevani P, Stern DF, Foiani M

A role for DNA primase in coupling DNA replication to DNA damage response.

EMBO J 1997; 639-50. doi: 10.1093/emboj/16.3.639

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Foiani M, Lucchini G, Plevani P

The DNA polymerase alpha-primase complex couples DNA replication, cell-cycle progression and DNA-damage response.

Trends Biochem Sci 1997; 424-7. doi: 10.1016/s0968-0004(97)01109-2

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Desdouets C, Santocanale C, Drury LS, Perkins G, Foiani M, Plevani P, Diffley JF

Evidence for a Cdc6p-independent mitotic resetting event involving DNA polymerase alpha.

EMBO J 1998; 4139-46. doi: 10.1093/emboj/17.14.4139

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Longhese MP, Foiani M, Muzi-Falconi M, Lucchini G, Plevani P

DNA damage checkpoint in budding yeast.

EMBO J 1998; 5525-8. doi: 10.1093/emboj/17.19.5525

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Foiani M, Ferrari M, Liberi G, Lopes M, Lucca C, Marini F, Pellicioli A, Muzi Falconi M, Plevani P

S-phase DNA damage checkpoint in budding yeast.

Biol Chem 1998; 1019-23. doi: 10.1515/bchm.1998.379.8-9.1019

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Pellicioli A, Lucca C, Liberi G, Marini F, Lopes M, Plevani P, Romano A, Di Fiore PP, Foiani M

Activation of Rad53 kinase in response to DNA damage and its effect in modulating phosphorylation of the lagging strand DNA polymerase.

EMBO J 1999; 6561-72. doi: 10.1093/emboj/18.22.6561

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Foiani M, Pellicioli A, Lopes M, Lucca C, Ferrari M, Liberi G, Muzi Falconi M, Plevani1 P

DNA damage checkpoints and DNA replication controls in Saccharomyces cerevisiae.

Mutat Res 2000; 187-96. doi: 10.1016/s0027-5107(00)00049-x

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Liberi G, Chiolo I, Pellicioli A, Lopes M, Plevani P, Muzi-Falconi M, Foiani M

Srs2 DNA helicase is involved in checkpoint response and its regulation requires a functional Mec1-dependent pathway and Cdk1 activity.

EMBO J 2000; 5027-38. doi: 10.1093/emboj/19.18.5027

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Pellicioli A, Lee SE, Lucca C, Foiani M, Haber JE

Regulation of Saccharomyces Rad53 checkpoint kinase during adaptation from DNA damage-induced G2/M arrest.

Mol Cell 2001; 293-300. doi: 10.1016/s1097-2765(01)00177-0

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Damia G, Silvestri S, Carrassa L, Filiberti L, Faircloth GT, Liberi G, Foiani M, D'Incalci M

Unique pattern of ET-743 activity in different cellular systems with defined deficiencies in DNA-repair pathways.

Int J Cancer 2001; 583-8. doi: 10.1002/ijc.1221

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Lee SE, Pellicioli A, Malkova A, Foiani M, Haber JE

The Saccharomyces recombination protein Tid1p is required for adaptation from G2/M arrest induced by a double-strand break.

Curr Biol 2001; 1053-7. doi: 10.1016/s0960-9822(01)00296-2

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Lopes M, Cotta-Ramusino C, Pellicioli A, Liberi G, Plevani P, Muzi-Falconi M, Newlon CS, Foiani M

The DNA replication checkpoint response stabilizes stalled replication forks.

Nature 2001; 557-61. doi: 10.1038/35087613

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Sogo JM, Lopes M, Foiani M

Fork reversal and ssDNA accumulation at stalled replication forks owing to checkpoint defects.

Science 2002; 599-602. doi: 10.1126/science.1074023

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Vaze MB, Pellicioli A, Lee SE, Ira G, Liberi G, Arbel-Eden A, Foiani M, Haber JE

Recovery from checkpoint-mediated arrest after repair of a double-strand break requires Srs2 helicase.

Mol Cell 2002; 373-85. doi: 10.1016/s1097-2765(02)00593-2

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Giannattasio M, Sommariva E, Vercillo R, Lippi-Boncambi F, Liberi G, Foiani M, Plevani P, Muzi-Falconi M

A dominant-negative MEC3 mutant uncovers new functions for the Rad17 complex and Tel1.

Proc Natl Acad Sci U S A 2002; 12997-3002. doi: 10.1073/pnas.202463999

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Foiani M

Molecular biology: Disruptive influence.

Nature 2003; 234-5. doi: 10.1038/423234a

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Lee SE, Pellicioli A, Demeter J, Vaze MP, Gasch AP, Malkova A, Brown PO, Botstein D, Stearns T, Foiani M, Haber JE

Arrest, adaptation, and recovery following a chromosome double-strand break in Saccharomyces cerevisiae.

Cold Spring Harb Symp Quant Biol 2000; 303-14. doi: 10.1101/sqb.2000.65.303

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Muzi-Falconi M, Giannattasio M, Foiani M, Plevani P

The DNA polymerase alpha-primase complex: multiple functions and interactions.

ScientificWorldJournal 2003; 21-33. doi: 10.1100/tsw.2003.05

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Muzi-Falconi M, Sabbioneda S, Plevani P, Foiani M

Sometimes size does matter.

Eur J Cancer 2003; 1337-8. doi: 10.1016/s0959-8049(03)00127-8

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Muzi-Falconi M, Liberi G, Lucca C, Foiani M

Mechanisms controlling the integrity of replicating chromosomes in budding yeast.

Cell Cycle 2003; 564-7.

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Lee SE, Pellicioli A, Vaze MB, Sugawara N, Malkova A, Foiani M, Haber JE

Yeast Rad52 and Rad51 recombination proteins define a second pathway of DNA damage assessment in response to a single double-strand break.

Mol Cell Biol 2003; 8913-23. doi: 10.1128/MCB.23.23.8913-8923.2003

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Ira G, Malkova A, Liberi G, Foiani M, Haber JE

Srs2 and Sgs1-Top3 suppress crossovers during double-strand break repair in yeast.

Cell 2003; 401-11. doi: 10.1016/s0092-8674(03)00886-9

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Lucca C, Vanoli F, Cotta-Ramusino C, Pellicioli A, Liberi G, Haber J, Foiani M

Checkpoint-mediated control of replisome-fork association and signalling in response to replication pausing.

Oncogene 2004; 1206-13. doi: 10.1038/sj.onc.1207199

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Lopes M, Cotta-Ramusino C, Liberi G, Foiani M

Branch migrating sister chromatid junctions form at replication origins through Rad51/Rad52-independent mechanisms.

Mol Cell 2003; 1499-510. doi: 10.1016/s1097-2765(03)00473-8

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